![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G044645.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
LFY |
Protein Properties |
Length: 422aa MW: 47269.6 Da PI: 8.6939 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G044645.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Hlu&pid=HL.SW.v1.0.G044645.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 605.7 | 9.1e-185 | 1 | 395 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddl 89
mdp++f+aslfkwdpr +++ +++ + v++a+ +aaa+ ar+l +leelf+ayG+ry+tvakiaelGftv tL +m+deeldd+
HL.SW.v1.0.G044645.1 1 MDPDTFTASLFKWDPRGLVSP--SSVGVPQLVPSAAYAAAAVRPARELGGLEELFHAYGIRYYTVAKIAELGFTVRTLANMRDEELDDM 87
9***************98854..456667777888878889999999****************************************** PP
FLO_LFY 90 mkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsede.etaldalsqeglseepvqeekeaagsggeglgeaelvaae 177
m+sls+ifr++llvGeryGikaavraerrrlee+ + ++rr s+d+ ++ +d+lsqeglseepvq+eke++gsgg+g g+++++a++
HL.SW.v1.0.G044645.1 88 MNSLSHIFRWELLVGERYGIKAAVRAERRRLEEDYDLSRRR---SADTpTNIIDSLSQEGLSEEPVQQEKEMVGSGGGG-GRWDQAAMT 172
*********************************88888888...45551569***********************9998.788887777 PP
FLO_LFY 178 ekkseeekkkaskk.kqkrkkkkelkse........ededeeeeededeeg............sgedgeerqrehPfivtepgevargk 245
++++++++++s+k q+r s+ + + e++ g+ + erqrehPfivtepgevargk
HL.SW.v1.0.G044645.1 173 VERRSKKQRRRSSKgAQRRVMAV--DSNihefvndmN---DAAEDEM---MmtttttmrtmsfLGRISCERQREHPFIVTEPGEVARGK 253
54444444444333133333332..233335653331...2222221...1223455556666666677******************** PP
FLO_LFY 246 knGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvG 334
knGLDYLf+LyeqCr+fL+qvq+iakerG+kcPtkvtn+vfr+akkagas+inkPkmrhYvhCYalhcLdee snalrra+kergenvG
HL.SW.v1.0.G044645.1 254 KNGLDYLFHLYEQCRDFLIQVQSIAKERGDKCPTKVTNEVFRFAKKAGASHINKPKMRHYVHCYALHCLDEEGSNALRRAYKERGENVG 342
***************************************************************************************** PP
FLO_LFY 335 awrqacykplvaiaarq.gwdidavfnahprLsiWYvPtkLrqLChlerskas 386
awrqacykplvaiaarq +wdid++f++hprLsiWYvPtkLrqLCh+er++a+
HL.SW.v1.0.G044645.1 343 AWRQACYKPLVAIAARQaAWDIDSIFSTHPRLSIWYVPTKLRQLCHAERNAAA 395
*************987637******************************9876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MDPDTFTASL FKWDPRGLVS PSSVGVPQLV PSAAYAAAAV RPARELGGLE ELFHAYGIRY 60 YTVAKIAELG FTVRTLANMR DEELDDMMNS LSHIFRWELL VGERYGIKAA VRAERRRLEE 120 DYDLSRRRSA DTPTNIIDSL SQEGLSEEPV QQEKEMVGSG GGGGRWDQAA MTVERRSKKQ 180 RRRSSKGAQR RVMAVDSNIH EFVNDMNDAA EDEMMMTTTT TMRTMSFLGR ISCERQREHP 240 FIVTEPGEVA RGKKNGLDYL FHLYEQCRDF LIQVQSIAKE RGDKCPTKVT NEVFRFAKKA 300 GASHINKPKM RHYVHCYALH CLDEEGSNAL RRAYKERGEN VGAWRQACYK PLVAIAARQA 360 AWDIDSIFST HPRLSIWYVP TKLRQLCHAE RNAAAATAST PSAPSTATAC SASAAAHLLP 420 F*
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Functional Description ? help
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Source |
Description |
UniProt | May regulate indeterminacy during leaf and flower development. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-143 | floral meristem identity control protein LEAFY (LFY) |