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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G033504.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
LBD |
| Protein Properties |
Length: 203aa MW: 22190.9 Da PI: 6.7072 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G033504.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 111.4 | 6.2e-35 | 15 | 114 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+Ca Ck++r+kC+++C +apyfpa++ +++ n++k+FG++n++++++++++++r +a+++l+ eA ar +dPv+G++g+i++l+ q++
HL.SW.v1.0.G033504.1 15 PCACCKHQRKKCSPNCQMAPYFPATKYQEYLNAQKIFGTTNIVRIVNSVEPHNRVAAADTLMAEALARRNDPVRGCYGIIRHLKLQVAL 103
7**************************************************************************************** PP
DUF260 90 lkaelallkee 100
++a+l +++++
HL.SW.v1.0.G033504.1 104 HEAQLLHVNRQ 114
****9988876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MASSGSDEDG EGFLPCACCK HQRKKCSPNC QMAPYFPATK YQEYLNAQKI FGTTNIVRIV 60
NSVEPHNRVA AADTLMAEAL ARRNDPVRGC YGIIRHLKLQ VALHEAQLLH VNRQLAFFKA 120
QEEKHVQKQM DLEKLQLFAS LSSPANDGAG TSAAMNNIAR PSHSNTGSSS TANPADLTPT 180
STHKQIIDLE SLDFEDESAD LY*
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