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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
HL.SW.v1.0.G013425.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
NAC |
Protein Properties |
Length: 271aa MW: 31514.2 Da PI: 8.0615 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G013425.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 149 | 2.4e-46 | 17 | 142 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
pGfrFhPt+eel+++yLk+ v+gk ++ ++i +++iy ++Pw Lp k+k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++
HL.SW.v1.0.G013425.1 17 PGFRFHPTEEELLDFYLKNMVSGKM-RF-DIIGSLNIYLFDPWVLPDKAKIGEREWYFFVPRDRKHGSGGRPNRTTERGFWKATGSDRR 103
9********************9998.55.78***************99999************************************** PP
NAM 92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
++s ++++gl+ktLvfykgrap+g+ktdWvm+eyrl
HL.SW.v1.0.G013425.1 104 IVSLsePKRVIGLRKTLVFYKGRAPRGTKTDWVMNEYRL 142
*997656778***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MATNSMDDVT PEVLELPGFR FHPTEEELLD FYLKNMVSGK MRFDIIGSLN IYLFDPWVLP 60 DKAKIGEREW YFFVPRDRKH GSGGRPNRTT ERGFWKATGS DRRIVSLSEP KRVIGLRKTL 120 VFYKGRAPRG TKTDWVMNEY RLPDNCKLSK DIVLCKVYRK ATSLKVLEQR VQMEEEMKNF 180 QNDNSPASPM DTISFCNPHE EQLIQHALVP TSDFVLKKEV EEVVPYGYKD KLPELQVPKL 240 GLDWTQEQFW THLNSPWLQN LTPLANILNF *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-48 | 1 | 165 | 4 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-48 | 1 | 165 | 4 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-48 | 1 | 165 | 4 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-48 | 1 | 165 | 4 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swm_B | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swm_C | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swm_D | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swp_A | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swp_B | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swp_C | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
3swp_D | 1e-47 | 1 | 165 | 7 | 173 | NAC domain-containing protein 19 |
4dul_A | 9e-48 | 1 | 165 | 4 | 170 | NAC domain-containing protein 19 |
4dul_B | 9e-48 | 1 | 165 | 4 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |