 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Gorai.004G147600.1 |
Common Name | B456_004G147600, LOC105791496 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
Family |
MYB |
Protein Properties |
Length: 409aa MW: 45819.5 Da PI: 7.4784 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.004G147600.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.5 | 2.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl
Gorai.004G147600.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
|
2 | Myb_DNA-binding | 46.7 | 7.5e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++
Gorai.004G147600.1 67 RGTFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
899*******************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENGEDNNK SQHTNSLDMV SGPSSELKLN TDNLKPGTAL YEQRPTSSIT 180 APAPGYQLEM EGCSSSNNLM TSTTRKDLFL DRFASTATTT NGQPCDFMPH FPVQQLSYAS 240 TNPRLSPWFS QSEFSSSSMS TLLPPLTTSP FLSSPIGFNP SVTLPSHTPS MPSFTVNNSY 300 AWGMADCSTS EKEEAPIHLM ETQPDEMKWP EYLNNPLLMA AALQNQAPQS SLYNIEIKSE 360 THCSTNTKSL SNSMWPQNQQ PQQQQEGLQN SDMCAKDIQR LTTAYGHI*
|