PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G150800.2.p
Common NameGLYMA_17G150800, LOC100816049
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family SRS
Protein Properties Length: 370aa    MW: 40935 Da    PI: 5.765
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G150800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70228.16e-094580439
               DUF702  4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39
                         ++ +C++CGn a+  C +e C+ CC  +   C+ hv
  Glyma.17G150800.2.p 45 NKPKCKQCGNVARSRCPYECCKSCCSRNQNPCHIHV 80
                         5679*******************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051422.8E-64881IPR007818Protein of unknown function DUF702
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MATPNNNNNN PNIINNNNIA TAKPGTLGVG VGAVPTPPKS QRGHNKPKCK QCGNVARSRC  60
PYECCKSCCS RNQNPCHIHV LKANSTFPDK APSSGASPLD QQSLDPPQST AGRVASLRQL  120
SNSFAQFNNL HLSLRSKKPL TRKDAAAINE WRFAKIKEYK ERNVEVENEA FDRYMQNVDL  180
LEEVLAVKSL DENVPSALES NPTTMESNEA MIPGLKLQLR SNSMRSDGLR MRIQQIVDEG  240
LKKLKKSAVD GDINESIDDE SNKASERGKG IERLSAISDL MEKINKARTE EDLKPCLEMK  300
TQLFNLDEGA SVKDLQDNEM HENETVVTDV VPAEGLDYSL PKFVTTTEID LETLNTIDKH  360
FSTQDIEQL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.228280.0leaf| root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G150800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006600881.10.0uncharacterized protein LOC100816049 isoform X2
RefseqXP_028208687.10.0uncharacterized protein LOC114391887 isoform X2
TrEMBLA0A445G7460.0A0A445G746_GLYSO; Uncharacterized protein
TrEMBLI1MVA70.0I1MVA7_SOYBN; Uncharacterized protein
STRINGGLYMA17G16100.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.16e-93