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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.12G182200.1.p |
Common Name | GLYMA_12G182200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 222aa MW: 24977.5 Da PI: 9.975 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.12G182200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.8 | 4.3e-16 | 63 | 111 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++k g+Wv+e+r+p++ ++r++lg++ t+e+Aa+a++ +++++g
Glyma.12G182200.1.p 63 IYRGVRQRK--GKWVCELREPKK---TTRIWLGTYPTPEMAARAHDVGALAIRG 111
69***9987..*********853...5********************9999987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MNFEIESPFS FPIQSSSPIS QSSPCTAPNN NPNLISQLPS LSQLVSHKRK GGRKKFKETR 60 HPIYRGVRQR KGKWVCELRE PKKTTRIWLG TYPTPEMAAR AHDVGALAIR GTSAILNFPN 120 SVSLLPIANS LSSRKDIRAA AVEAAESLRP ISNSHHKKIS RKKKNNLDLS STMFFDEEAL 180 FNTPGLLDRM AESLDIFPLL PSMDYYWDDH AYCTDFNLWT D*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Mostly expressed in developing seeds and apices. {ECO:0000269|PubMed:17136305}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. {ECO:0000269|PubMed:17136305}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By calcium ion, methyl-jasmonate (MeJA), cold, drought, and high salinity stress. {ECO:0000269|PubMed:17136305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 1e-108 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |