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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.10G240200.1.p |
Common Name | GLYMA_10G240200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TCP |
Protein Properties |
Length: 312aa MW: 32962.9 Da PI: 6.8041 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G240200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 122.2 | 5.9e-38 | 62 | 167 | 2 | 106 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaesssssas 83
a++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++++a ++ ++s+ +
Glyma.10G240200.1.p 62 AAAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVsvggtlkiPTSSEARA-- 149
789*************************************************************999995554333322211111111.. PP
TCP 84 nsssgkaaksaakskksqksaas 106
+ +++++k++++++ +++
Glyma.10G240200.1.p 150 -----QGEEDTPKKRRRRALKSE 167
.....112222222222222222 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MEVNPTHDGG DDTSETPLPP MVDPSPSPSP QMKEEVMDAE QGGDVSLPMS VVPASLTVST 60 EAAAKRSSKD RHTKVEGRGR RIRMPATCAA RIFQLTRELG HKSDGETIRW LLEHAEPAII 120 EATGTGTIPA IAVSVGGTLK IPTSSEARAQ GEEDTPKKRR RRALKSEFIN LNENQVSVSS 180 GLAPIAQSSA YGSGGGGLVP LWHGNGAAAG PFFVFPNASN PPQYWAIPAT AAPFFNVQAR 240 PISGFVSALQ MQHDNHHHSL INAAASGSVK SSSTVSVTSS AASTQMLKDF SFEIYDKKEL 300 QFLGQPPQPS S*
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