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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G163600.1.p |
Common Name | GLYMA_06G163600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
LFY |
Protein Properties |
Length: 410aa MW: 46244 Da PI: 6.7394 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G163600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 645 | 1.1e-196 | 1 | 395 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaa....aapp...arlleeaavseap....leaaaaaaarklreleelfkayGvryltvakiaelGftvstLv 79
mdp+af+aslfkwdpr++ p + l e av+++p ++ + aaa r+l +leelf+ayG+ry+t+akiaelGftvstLv
Glyma.06G163600.1.p 1 MDPDAFTASLFKWDPRTVLppapP--PpppRPPLLEYAVAPPPvtpsFHPSRAAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLV 88
9***************99866441..1344444555555555543333444455555677****************************** PP
FLO_LFY 80 dmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrk..llsedeet.aldalsqeglseepvqe.ekeaagsgg 165
dmkdeeldd+m+sls+ifr+dllvGeryGikaavraerrr+e+++ +++ ++ lls+d++t aldalsqeglseepv + ekea+gsgg
Glyma.06G163600.1.p 89 DMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRVEDDDIKRRNNNnnLLSADTTTnALDALSQEGLSEEPVMQrEKEAVGSGG 178
*******************************************98666554344778887766**************9996777888888 PP
FLO_LFY 166 eglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdL 255
++ ++e+v+a+e+++++++++++ + k ++ +++ +ee ed+e e++++++ ++ +g erqrehPfivtepgevargkknGLDYLf+L
Glyma.06G163600.1.p 179 GS--TWEVVVAAEERRKQQRRRRT--RMKTNNLHHEDNEELEDDEGEQNDEGNINTGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHL 264
77..99999988544333333332..2222222222222223333333333444566688****************************** PP
FLO_LFY 256 yeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplv 345
yeqCrefL+qvq+iak+rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdee sn+lrrafkergenvGawrqacykplv
Glyma.06G163600.1.p 265 YEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLV 354
****************************************************************************************** PP
FLO_LFY 346 aiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
aiaarqgwdida+fnahprLsiWYvPtkLrqLCh+er++a+
Glyma.06G163600.1.p 355 AIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAA 395
*************************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MDPDAFTASL FKWDPRTVLP PAPPPPPPRP PLLEYAVAPP PVTPSFHPSR AAAPRELGGL 60 EELFQAYGIR YYTAAKIAEL GFTVSTLVDM KDEELDDMMN SLSQIFRWDL LVGERYGIKA 120 AVRAERRRVE DDDIKRRNNN NNLLSADTTT NALDALSQEG LSEEPVMQRE KEAVGSGGGS 180 TWEVVVAAEE RRKQQRRRRT RMKTNNLHHE DNEELEDDEG EQNDEGNINT GGGCERQREH 240 PFIVTEPGEV ARGKKNGLDY LFHLYEQCRE FLMQVQAIAK DRGEKCPTKV TNQVFRYAKK 300 AGASYINKPK MRHYVHCYAL HCLDEEVSNE LRRAFKERGE NVGAWRQACY KPLVAIAARQ 360 GWDIDAIFNA HPRLSIWYVP TKLRQLCHAE RNSAAASSSV SAGSAHLPF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Highly expressed in leaf, leaflet, inflorescence and lateral shoot primordia on the main shoot axis, and in floral organ and carpel primordia. |
Functional Description ? help
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Source |
Description |
UniProt | May regulate indeterminacy during leaf and flower development. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ448810 | 0.0 | DQ448810.1 Glycine max LEAFY-like protein (LFY) mRNA, LFY-1 allele, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-146 | floral meristem identity control protein LEAFY (LFY) |