 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.02G039300.1.p |
Common Name | GLYMA_02G039300, LOC100805376 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
ERF |
Protein Properties |
Length: 392aa MW: 43268.9 Da PI: 6.8446 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G039300.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g
Glyma.02G039300.1.p 55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104
59*******.**********93....35999**********************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 392 aa
Download sequence Send
to blast |
MEEAMRRLNG VAPIIGPDSK GDGGLIANNP KRTSAVNKRA LREDGGGGGG GGAMRYRGVR 60 RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPTSPQPS 120 SATTEHLFPN FNNNNNFHKH SLFNHHRNRH ITGSNTCFDH PHSVDFSAPR NPSSLNMLLF 180 RDLIHSNPSL LSSSSTQNFH DQFYNKSTST FSSLPVSPSL APPSYSMNNS CGGSLSVKMN 240 TFPTCGTNFA EKGDDGDGFF SRESSDSGLL EEIVNKFLPR TKPSKCETTF ANPQEESLLL 300 PPLVSESTLV STGQQYYDDD MKKGFPKNEG LGVFYSDQGF PMQQFDTSNG FNSMAMENDQ 360 NIINNAENCV VEDVFQYQEL LNAFAIRMQN A*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JN590243 | 0.0 | JN590243.1 Glycine max ethylene-responsive transcription factor ESR1 (ESR1) gene, complete cds. |