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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.01G177200.1.p |
Common Name | GLYMA_01G177200, LOC100807470 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 526aa MW: 58688.6 Da PI: 5.5531 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.01G177200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 276.7 | 6.9e-85 | 168 | 524 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
+e L+++A+++++++l+ aq +L+rl+++ +sp g+p++R+a+y++eAL++ l++ + +p+ +s + ++++ +k+fs +sPi
Glyma.01G177200.1.p 168 IEELIRAADCFDTKQLHVAQLILERLNQRlRSPVGKPLHRAAFYLKEALQSLLSG------SNRTPRISSLVEIVHSIRTFKAFSGISPI 251
679*************************99*************************......5556666666678888999999******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+ fs +t+Nq +l+ ++ ++ +H+iDfdi+ G+Q+++L++++a++++++p lRiT+v+++e + e ++++La+fA l+++++ ++
Glyma.01G177200.1.p 252 PMFSIFTTNQIVLDHAA-SSFMHVIDFDIGLGIQYASLMKEIAEKAADSPVLRITAVVPEE--YAVESTLVRDNLAQFALDLRIRVQVEF 338
**************976.5799*************************************66..8999999******************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.....adhnsesFlerflealeyys 265
+ +++e+l++++ ++ +gE++aV l+ +++r l ++ + ++L v+++sP vvv+v+ e a +++sF ++++++leyys
Glyma.01G177200.1.p 339 VPLRTFENLSFKAVKFVNGENTAVLLSPAIFRHL---GNAA----AFLADVRRISPSVVVFVDGEgwaetATASAASFRRGVVSSLEYYS 421
9999*****************************9...4444....5*****************9976553444777************** PP
GRAS 266 alfdsl.eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
++++sl +++++ e+ + +E + l+++i +v + + ++ Wre++ aG++pv+ls++a qa++ll+k + +g++v ++
Glyma.01G177200.1.p 422 MMLESLdASTVGGGGEWVRRIEMMQLRPKILAAVESAWR-------RVPPWREAFYGAGMRPVQLSQFADFQAECLLAKSQIRGFHVAKR 504
******778889999***************999866555.......489***************************************** PP
GRAS 355 sgslvlgWkdrpLvsvSaWr 374
+++lvl W+dr++v++SaWr
Glyma.01G177200.1.p 505 QNELVLFWHDRAIVATSAWR 524
*******************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0030154 | Biological Process | cell differentiation |
GO:0048831 | Biological Process | regulation of shoot system development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MRVPVPSSPQ ANPKPTNNVV RTIALPNLNN STTPPTGLCY EPTSVLDLCR SPSPGTEKPT 60 TDHSVLVTNS QDYLDLEDHA LHNLDWDSIM KDLGLHDDSA TPVLKTFLHP DDDDDDDNNN 120 NPSCDDFTLF DHALEFTTLS DIYSNQNFAF DFNHLPHDFN HLNGFDFIEE LIRAADCFDT 180 KQLHVAQLIL ERLNQRLRSP VGKPLHRAAF YLKEALQSLL SGSNRTPRIS SLVEIVHSIR 240 TFKAFSGISP IPMFSIFTTN QIVLDHAASS FMHVIDFDIG LGIQYASLMK EIAEKAADSP 300 VLRITAVVPE EYAVESTLVR DNLAQFALDL RIRVQVEFVP LRTFENLSFK AVKFVNGENT 360 AVLLSPAIFR HLGNAAAFLA DVRRISPSVV VFVDGEGWAE TATASAASFR RGVVSSLEYY 420 SMMLESLDAS TVGGGGEWVR RIEMMQLRPK ILAAVESAWR RVPPWREAFY GAGMRPVQLS 480 QFADFQAECL LAKSQIRGFH VAKRQNELVL FWHDRAIVAT SAWRC*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235417 | 0.0 | AC235417.1 Glycine max strain Williams 82 clone GM_WBb0135A07, complete sequence. |