![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gh_D07G0469 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
LFY |
Protein Properties |
Length: 406aa MW: 45062.7 Da PI: 7.2905 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gh_D07G0469 | genome | NAU-NBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Ghi&pid=Gh_D07G0469) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 635.4 | 8.8e-194 | 1 | 388 | 1 | 386 |
FLO_LFY 1 mdpeafsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklr......eleelfkayGvryltvakiaelGftvstLvdmkdeelddlmk 91
mdpe+f++ +fkwdpr +a++parl+e a++++p+++a+aaaa + ++eelf+ayG+ry+t+akiaelGftv+tL++mk+eeld++m+
Gh_D07G0469 1 MDPETFASGsFFKWDPRGLMAPTPARLVEAVAAVPQPQTVAVAAAAAYMGrprelgGIEELFQAYGIRYYTAAKIAELGFTVNTLLGMKEEELDEMMN 98
9****977559*********99999**999999999866655555544334777889***************************************** PP
FLO_LFY 92 slseifrldllvGeryGikaavraerrrleeeeaekkrrkll......sedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekksee 183
s+s+ifr++llvGeryGikaavraerrrleee+ ++rr+l+ ++ ++aldalsqeglseepvq+ekeaagsgg+g ++e+v
Gh_D07G0469 99 SVSQIFRWELLVGERYGIKAAVRAERRRLEEED--SRRRHLVlgdtttTTTAANALDALSQEGLSEEPVQQEKEAAGSGGGG--TWEMVIGGG----- 187
*******************************88..66666663554333333449***********************9999..999999883..... PP
FLO_LFY 184 ekkkaskkkqkrkkkkelkseededeeeeededeeg.sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk 280
++k++ ++++ +kk ++ ++ ++ e +d de+g +g +g erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iak+rGekcPtk
Gh_D07G0469 188 RRKQQ---RRRKGQKKVVEVDNGDEFEGGDDYDENGdGGGGGYERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKDRGEKCPTK 282
33333...23333333333445555555555555441566788******************************************************* PP
FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLC 378
vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplv+iaarqgwdida+fnahprL+iWYvPtkLrqLC
Gh_D07G0469 283 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVSIAARQGWDIDAIFNAHPRLAIWYVPTKLRQLC 380
************************************************************************************************** PP
FLO_LFY 379 hlerskas 386
h+er+ a+
Gh_D07G0469 381 HAERNGAA 388
****9765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MDPETFASGS FFKWDPRGLM APTPARLVEA VAAVPQPQTV AVAAAAAYMG RPRELGGIEE 60 LFQAYGIRYY TAAKIAELGF TVNTLLGMKE EELDEMMNSV SQIFRWELLV GERYGIKAAV 120 RAERRRLEEE DSRRRHLVLG DTTTTTTAAN ALDALSQEGL SEEPVQQEKE AAGSGGGGTW 180 EMVIGGGRRK QQRRRKGQKK VVEVDNGDEF EGGDDYDENG DGGGGGYERQ REHPFIVTEP 240 GEVARGKKNG LDYLFHLYEQ CRDFLIQVQN IAKDRGEKCP TKVTNQVFRY AKKAGASYIN 300 KPKMRHYVHC YALHCLDEEA SNALRRAFKE RGENVGAWRQ ACYKPLVSIA ARQGWDIDAI 360 FNAHPRLAIW YVPTKLRQLC HAERNGAAAV AAGSSSVSGG HDHMGF
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: In developing inflorescences, leaf primordia and very young leaves. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-153 | floral meristem identity control protein LEAFY (LFY) |