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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_A07G0404 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
LFY |
| Protein Properties |
Length: 406aa MW: 45235.9 Da PI: 7.0511 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A07G0404 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 637 | 2.9e-194 | 1 | 387 | 1 | 385 |
FLO_LFY 1 mdpeafsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklr......eleelfkayGvryltvakiaelGftvstLvdmkdeelddlmk 91
mdpe+f++ +fkwdpr ++a++parl+e a++++p+++a+aaaa + ++eelf+ayG+ry+t+akiaelGftv+tL++mk+eeld++m+
Gh_A07G0404 1 MDPETFASGsFFKWDPRGMMAPTPARLMEAVAAVPQPQTVAVAAAAAYMGrprelgGIEELFQAYGIRYYTAAKIAELGFTVNTLLGMKEEELDEMMN 98
9****977559***********9*****99999999966665555544334777889***************************************** PP
FLO_LFY 92 slseifrldllvGeryGikaavraerrrleeeeaekkrrkll......sedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekksee 183
s+s+ifr++llvGeryGikaavraerrrleee+ ++rr+l+ ++ ++aldalsqeglseepvq+ekeaagsgg g ++e+v
Gh_A07G0404 99 SVSQIFRWELLVGERYGIKAAVRAERRRLEEED--SRRRHLVlgdtttTTTAANALDALSQEGLSEEPVQQEKEAAGSGGWG--TWEMVIGGG----- 187
*******************************88..66666663554333333449***********************9988..999999883..... PP
FLO_LFY 184 ekkkaskkkqkrkkkkelkseededee.eeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk 280
++k++ ++++ +kk ++ ++ ++ e ++d+++ ++g +g erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iak+rGekcPtk
Gh_A07G0404 188 RRKQQ---RRRKGQKKVVEVDNGDEFEgGDDDDENGDGGGGGYERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKDRGEKCPTK 282
23333...22222333333334444440444445555677788******************************************************* PP
FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLC 378
vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplv+iaarqgwdida+fnahprL+iWYvPtkLrqLC
Gh_A07G0404 283 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVSIAARQGWDIDAIFNAHPRLAIWYVPTKLRQLC 380
************************************************************************************************** PP
FLO_LFY 379 hlerska 385
h+er+ a
Gh_A07G0404 381 HAERNGA 387
****975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MDPETFASGS FFKWDPRGMM APTPARLMEA VAAVPQPQTV AVAAAAAYMG RPRELGGIEE 60
LFQAYGIRYY TAAKIAELGF TVNTLLGMKE EELDEMMNSV SQIFRWELLV GERYGIKAAV 120
RAERRRLEEE DSRRRHLVLG DTTTTTTAAN ALDALSQEGL SEEPVQQEKE AAGSGGWGTW 180
EMVIGGGRRK QQRRRKGQKK VVEVDNGDEF EGGDDDDENG DGGGGGYERQ REHPFIVTEP 240
GEVARGKKNG LDYLFHLYEQ CRDFLIQVQN IAKDRGEKCP TKVTNQVFRY AKKAGASYIN 300
KPKMRHYVHC YALHCLDEEA SNALRRAFKE RGENVGAWRQ ACYKPLVSIA ARQGWDIDAI 360
FNAHPRLAIW YVPTKLRQLC HAERNGAAVV AAASSSVSGG HDHMGF
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In developing inflorescences, leaf primordia and very young leaves. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 1e-154 | floral meristem identity control protein LEAFY (LFY) |
