 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSVIVT01011650001 |
| Common Name | VIT_01s0011g05830 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
| Family |
ARR-B |
| Protein Properties |
Length: 429aa MW: 46628.3 Da PI: 6.7843 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSVIVT01011650001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 90.4 | 1.6e-28 | 219 | 272 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
GSVIVT01011650001 219 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 272
79*******************.********************************8 PP
|
| 2 | Response_reg | 77.9 | 3.5e-26 | 35 | 143 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90
vl+vdD+ + +++l+q+l++ y +v+++++++ al++l+ek+ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + +
GSVIVT01011650001 35 VLVVDDDVTCLKILEQMLRRCLY-HVTTCSQATIALNILREKKgcFDIVLSDVHMPDMDGYKLLEHVGLEM-DLPVIMMSADGRTSAVMRGI 124
89*********************.*******************************************6644.8******************* PP
HTTESEEEESS--HHHHHH CS
Response_reg 91 kaGakdflsKpfdpeelvk 109
+ Ga d+l Kp+ +eel +
GSVIVT01011650001 125 RHGACDYLIKPIREEELKN 143
****************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042802 | Molecular Function | identical protein binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MAALLKVPPQ SSGGTNGSCK ADVVVSDQFP AGLRVLVVDD DVTCLKILEQ MLRRCLYHVT 60
TCSQATIALN ILREKKGCFD IVLSDVHMPD MDGYKLLEHV GLEMDLPVIM MSADGRTSAV 120
MRGIRHGACD YLIKPIREEE LKNIWQHVVR KKWNENKEHE HSGSLEDNDR HKRGGEDAEY 180
ASSVNEGAEG ILKGQKKRRD SKDEDDGELE NEDPSTSKKP RVVWSVELHQ QFVSAVNQLG 240
IDKAVPKRIL ELMNVPGLTR ENVASHLQKF RLYLKRLSGV AQQQGGIPNS FCGPVEPNVK 300
LGSLGRFDIQ ALAASGQIPP QTLAALQAEL LGRPTSNLVL PAMDQPALLQ ASLQGPKCIP 360
VEHGVAFGQP LVKCQTNISK HFPPTVVSTE DVPSGFGAWP SNSLGTVGTS GSLGGLSAQN 420
NNILMDMK*
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| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Vvi.10343 | 0.0 | bud| cell culture| fruit| inflorescence| leaf |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
