PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P00170_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 375aa    MW: 40018 Da    PI: 9.4142
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P00170_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1673.2e-21278341164
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                            e++l+rerrkq+NRe+ArrsR+RK++e+eeL+++v  L +eN+aL+ ele+l+k++ +l++e++
  GSMUA_Achr6P00170_001 278 ERDLRRERRKQSNRESARRSRLRKQQECEELARRVTDLNNENSALRVELENLQKLCGELEAENK 341
                            799********************************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.7E-213105IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.5E-11142253No hitNo description
Gene3DG3DSA:1.20.5.1708.8E-18272337No hitNo description
PfamPF001702.3E-19278341IPR004827Basic-leucine zipper domain
SMARTSM003381.1E-18278342IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.806280343IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-10281336No hitNo description
PROSITE patternPS000360285300IPR004827Basic-leucine zipper domain
CDDcd147028.94E-19287333No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MPMGSPKEKR TTGASSASTS SKAPREAAPP ATALVPPEWS ASFQAFYDRG AAAAAVMPQA  60
FYSPSPIATA QPVVWGAQQV MPPYGSPIAY ASFYPQGGFY AQPPINAGVA FRTRETEGRP  120
TEAKDNQPTS KRTSKILEGS PGKSGNDGKR ASGAGENASQ SDDSETDGSS DTKEDYDQPK  180
EHSPNRKRSY GNTTEGEGSH SFDTAGNSGT AGRVRTAKKL PVSAPGRAAL RGPPTNLNIG  240
MDFWGASPAG SVPSKVGSSA LNSGPVMIGR SSSILQDERD LRRERRKQSN RESARRSRLR  300
KQQECEELAR RVTDLNNENS ALRVELENLQ KLCGELEAEN KSITGELKQR YGPEFLSELS  360
SSIDASKLQS DVASS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294300RRSRLRK
2294301RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009402842.10.0PREDICTED: G-box-binding factor 1-like
TrEMBLM0T2W50.0M0T2W5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P00170_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.14e-38G-box binding factor 1