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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr4P01560_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
C2H2 |
Protein Properties |
Length: 322aa MW: 36375.2 Da PI: 8.0074 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr4P01560_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 16.7 | 2.1e-05 | 154 | 173 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C k+F+r n++ H+
GSMUA_Achr4P01560_001 154 FSCPVCYKTFNRYNNMQMHM 173
89*****************9 PP
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2 | zf-C2H2 | 15.2 | 6.4e-05 | 238 | 260 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F k + ++H +++
GSMUA_Achr4P01560_001 238 FMCRKCGKAFAVKGDWRTHEKNC 260
89*****************9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MANPYTKFFK LYNHCPFLSD PSSTPTATQS YSFSPHCYSN SFPRQLPSSP LKEALPLLSL 60 CATRHQEEEE EEEEEGTSCD ASIGGGKKKA VRVDDEAADE VDAVTVALHI GLPSPVDDVV 120 TLGYASGNHP LGRLNKGQYW IPTPSQILIG PTQFSCPVCY KTFNRYNNMQ MHMWGHGSQY 180 RKGPESLRGI QPTAMLRLPC YCCAPGCRNN IDHPRSKPLK DFRTLQAHYK RKHGIKPFMC 240 RKCGKAFAVK GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKSFGQGHA AYGINWFENE 300 DDPSSEIEHD CHQPKELEKL TC
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |