|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GRMZM2G379167_P01 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
G2-like |
Protein Properties |
Length: 402aa MW: 44260.8 Da PI: 7.0541 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G379167_P01 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 78.2 | 1e-24 | 245 | 289 | 1 | 45 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45
kpr+rWtpeLHe+Fv+av++LGGsekAtPk++ ++mkv+gLt++h
GRMZM2G379167_P01 245 KPRMRWTPELHECFVDAVNKLGGSEKATPKAVQKVMKVDGLTIYH 289
79******************************************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MGITCSHTST MNRLHSGRVP PCLSSAITPV PAFSEASFPS FTEQRSSFAE RKLPVSSVAS 60 IGTSMAAYDT MSTHMLASNF TNESPNRQLC SGSYVTEPSD PDTPLLATHS SLMADSTPLF 120 VDFSEVSEHI CLNQGQLLGL FDYPASVDFY KSKNMTIFGQ QIQDTITVDP NTHLTPQNEL 180 FSGSSMQLQK TVGSAESVLK TVDARSATPQ SYLYCHTESE RSVPEPFNCD KLGADSLPFS 240 NTAPKPRMRW TPELHECFVD AVNKLGGSEK ATPKAVQKVM KVDGLTIYHK HRIVQHRSAG 300 VPGRRGSHTE VDDDSIPQSK GEGGVEGGLV SQIGLQKQLH EQLEIQRRLQ LQVEEHNKYL 360 ETVIAKQNES LKKLRALRGF RDRVRRVLQD SEAPGVRAHC AQ
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-19 | 245 | 299 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-19 | 245 | 299 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-19 | 245 | 299 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-19 | 245 | 299 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-19 | 245 | 299 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AY771221 | 2e-84 | AY771221.1 Zea mays RFLP probe php10017 (CBM 5.09) genomic sequence. |