PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00004923.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 15107.9 Da PI: 4.9065 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.6 | 2.6e-15 | 18 | 117 | 6 | 98 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiyk...vePwdLpkkvka.....eekewyfFskrdkkyatgkrknr 76 F+P+d+elv yL kv ++ + +++e++iy + Pw++ + +++ +++ +yfFs+++k ++++ r++r FANhyb_rscf00004923.1.g00001.1 18 TFQPSDDELVGVYLYSKVFVSTYKQ--TFPEIRIYGkdgMPPWEIWR-IYQqsrfpHQDFIYFFSPAEKMNPNKARQSR 93 6******************999666..56777776512268****73.3331233333456****************** PP NAM 77 .atksgy.Wkatgkdkevlskkge 98 + ++gy W+at + k+++++++e FANhyb_rscf00004923.1.g00001.1 94 kVGTDGYtWSATERVKPIYVAGNE 117 55557878***********97443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-13 | 10 | 117 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.185 | 13 | 131 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-7 | 18 | 109 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MDQQFATLDQ LSVGAVTTFQ PSDDELVGVY LYSKVFVSTY KQTFPEIRIY GKDGMPPWEI 60 WRIYQQSRFP HQDFIYFFSP AEKMNPNKAR QSRKVGTDGY TWSATERVKP IYVAGNEEAF 120 GVSVREEGEQ G |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011464582.1 | 2e-55 | PREDICTED: uncharacterized protein LOC105351558 isoform X2 | ||||
Refseq | XP_011464583.1 | 2e-55 | PREDICTED: uncharacterized protein LOC105351558 isoform X3 | ||||
Refseq | XP_011464584.1 | 2e-55 | PREDICTED: uncharacterized protein LOC105351558 isoform X4 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16467 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-08 | NAC domain containing protein 2 |