PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS666206.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 68aa MW: 8106.18 Da PI: 10.7454 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.1 | 9.4e-09 | 46 | 68 | 3 | 26 |
SS-HHHHHHHHHHHHHTTTT-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWkt 26 W++eE e+++da +++G++ Wk+ EcS666206.10 46 QWSKEELERFYDAYRKHGKD-WKK 68 6*****************99.*97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.44E-6 | 41 | 68 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 10.096 | 42 | 68 | IPR017884 | SANT domain |
Pfam | PF00249 | 6.2E-6 | 46 | 68 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MAPTRKSRSV YKRYSNLNEV SPEKDVGSSK SSRNRKKKLS DLLGPQWSKE ELERFYDAYR 60 KHGKDWKK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010048971.2 | 1e-38 | PREDICTED: LOW QUALITY PROTEIN: protein ALWAYS EARLY 2-like | ||||
Swissprot | Q6A331 | 3e-21 | ALY1_ARATH; Protein ALWAYS EARLY 1 | ||||
TrEMBL | A0A059CSG1 | 4e-37 | A0A059CSG1_EUCGR; Uncharacterized protein | ||||
TrEMBL | A0A059CSP1 | 4e-37 | A0A059CSP1_EUCGR; Uncharacterized protein | ||||
TrEMBL | A0A059CT70 | 5e-37 | A0A059CT70_EUCGR; Uncharacterized protein | ||||
STRING | XP_010048971.1 | 5e-38 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM21251 | 5 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 2e-15 | DNA binding |
Publications ? help Back to Top | |||
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