PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053131.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 453aa    MW: 48844.6 Da    PI: 7.4095
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053131.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.1e-29195253259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   +Dg++WrKYGqK  kg+++pr+YYrCt+a gCpv+k+++r+ +d++++++tYeg+H h+
  EcC053131.20 195 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAvGCPVRKQIQRCVRDKTILITTYEGKHSHP 253
                   7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081128.541189255IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.7E-30191255IPR003657WRKY domain
SuperFamilySSF1182907.85E-26192255IPR003657WRKY domain
SMARTSM007742.8E-33194254IPR003657WRKY domain
PfamPF031064.5E-25196253IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006508Biological Processproteolysis
GO:0006629Biological Processlipid metabolic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MIPCSQGNFM DHQLAQEYKQ SSSPDGRPAT MELDFFSGDR LRSDGNDHRA SVPDSAKLHP  60
LDDLKSLRDR LEELKGENQK LRSMLELFSK NYTAVYAQLL LVMQTKASII HKFQDEGLAN  120
AGVSPYGDNL RERSEPSVEA GITDQQCDGQ SMENHIGMKR ALSSTNETSS DDGQTNQSMT  180
TLESPNVARG KNIISDGCQW RKYGQKLAKG NPCPRAYYRC TMAVGCPVRK QIQRCVRDKT  240
ILITTYEGKH SHPLPPTAAV LAKTTSAAAS MLLSGSTATE AAPNGNSNPS FLSSSNNFLF  300
PHHFLYSNSS TMASLSSSSP NYPTITLDLA QAPLINNHSL HSQRALSSTP NCQTQNIPPS  360
NGYPGFLGHP QMHMLPPPQA QHLLLNNQYP SSLMGNVGAT IASDPSFGSK LAIAISSMVG  420
ASATHPGMLN SNTNGCTNIS SSTSAIIAHD DAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-211922561275WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010024882.10.0PREDICTED: probable WRKY transcription factor 47
RefseqXP_010024883.10.0PREDICTED: probable WRKY transcription factor 47
TrEMBLA0A059B6X01e-176A0A059B6X0_EUCGR; Uncharacterized protein
STRINGXP_010024882.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.18e-45WRKY family protein