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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EcC052855.20 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
| Family |
NAC |
| Protein Properties |
Length: 133aa MW: 15445.6 Da PI: 9.4157 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EcC052855.20 | genome | ECGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 75.9 | 9.6e-24 | 4 | 121 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
++F+Ptde l +yL++k++g +l+ i+e+d+y+ ePw++ + ++e+ y F++ +k+ ++r r++ sg+Wk++ + + + gelv
EcC052855.20 4 LVKFRPTDEHLFAHYLQQKATGAPLPP-GLIEECDLYSQEPWRIF-DT-TSEQTFYVFTTLRKN---KSRVLRTAGSGTWKEQHAMR-IPDILGELV 93
589*********************999.89**************6.32.345667888877664...579***********998754.5555899** PP
NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
g kk++ f gr +++++ +W+m e+++
EcC052855.20 94 GYKKSFKFQGGRGSSATSGRWIMYEFSM 121
**************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 133 aa
Download sequence Send
to blast |
MNPLVKFRPT DEHLFAHYLQ QKATGAPLPP GLIEECDLYS QEPWRIFDTT SEQTFYVFTT 60
LRKNKSRVLR TAGSGTWKEQ HAMRIPDILG ELVGYKKSFK FQGGRGSSAT SGRWIMYEFS 120
MCDERVRISF HVY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swm_B | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swm_C | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swm_D | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swp_A | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swp_B | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swp_C | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
| 3swp_D | 1e-17 | 1 | 127 | 20 | 151 | NAC domain-containing protein 19 |
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