PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC047541.40 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 311aa MW: 34687.4 Da PI: 5.0362 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.7 | 3.7e-31 | 139 | 197 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k vers++dp+v+++tY+geHnh+ EcC047541.40 139 SDMWAWRKYGQKPIKGSPHPRSYYRCSSSkGCLARKLVERSSSDPRVFVVTYTGEHNHT 197 79*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.3E-31 | 124 | 199 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 33.637 | 133 | 199 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-26 | 136 | 199 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-37 | 138 | 198 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.1E-26 | 140 | 196 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005975 | Biological Process | carbohydrate metabolic process | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0003899 | Molecular Function | DNA-directed RNA polymerase activity | ||||
GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MNSVRVDDWD LQAVVRGCGV GESSYDIMDW MSWQSDADLR QEEILFGGFS DFAETSALLD 60 DLEQLYKPFY PEPEAVRDAG LIPEEVIEEA ENKLKEEEPL TDASTTSQAV HYEETKQRRR 120 KNQQKREVHH VTAADGVSSD MWAWRKYGQK PIKGSPHPRS YYRCSSSKGC LARKLVERSS 180 SDPRVFVVTY TGEHNHTHPT RRNALAGSTR NKFASPKAKQ PAIAKGNRPT PLANGPCDSP 240 SSAATRSPMT PPPVVTHSEE DKRQLSSNES GLSSGSDENN TVPTMFFSDE MFMGFEELND 300 MVMDPGVAGY S |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-18 | 126 | 199 | 2 | 74 | WRKY transcription factor 1 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00422 | DAP | Transfer from AT4G01250 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010053209.1 | 0.0 | PREDICTED: WRKY transcription factor 22 | ||||
TrEMBL | A0A059CGI4 | 0.0 | A0A059CGI4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010053209.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7810 | 27 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 1e-43 | WRKY family protein |