PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC043555.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 406aa    MW: 43178.5 Da    PI: 7.2539
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC043555.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30221279259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ver+++dp ++++tY++eHnh 
  EcC043555.40 221 SDEWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVERNRSDPGIFIVTYTSEHNHA 279
                   79*************************998****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-31207281IPR003657WRKY domain
PROSITE profilePS5081133.166215281IPR003657WRKY domain
SuperFamilySSF1182902.62E-26218281IPR003657WRKY domain
SMARTSM007742.8E-37220280IPR003657WRKY domain
PfamPF031061.1E-25222278IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006508Biological Processproteolysis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008233Molecular Functionpeptidase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MTRKPFDFFP AFLVGKFTGS PPPPSASFYN SPPLANAKQS AVAAFAEDFS ELRLYNSRAR  60
EAMEVDWDLH AVVRGCTASS SSSSAAAAAA ASSVAERRLE PAASRAPFSA GEGPDSEPFE  120
TRKGAFLEEL HELYKPFLPA YGPLFSHRSS LSVSSPLAVE GAKSSSSAGL MQKRPFQSAS  180
AIAPLAPFKT SSSAPRSKKR RQNRKSQMKV VRQVPADKVS SDEWAWRKYG QKPIKGSPYP  240
RSYYRCSSSK GCLARKQVER NRSDPGIFIV TYTSEHNHAA PTHRSSLAGS TRPKTSTPET  300
EVSVDSAATA TTTPGTSGEE EAAHVPQSTS SESGEEKEYS QSSSMLDNDG EDETGGSSGA  360
ALSDDFFVGL EGLLGSHYGD PSSDPSQPWF GLSWSAGDAV TATGGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-18206282380Disease resistance protein RRS1
5w3x_D2e-18206282380Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053762.10.0PREDICTED: WRKY transcription factor 22
TrEMBLA0A059CIQ60.0A0A059CIQ6_EUCGR; Uncharacterized protein
STRINGXP_010053762.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-42WRKY family protein