PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC033507.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 405aa    MW: 43499.9 Da    PI: 5.3919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC033507.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.2e-1858108155
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   ++y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  EcC033507.10  58 TRYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 108
                   68********.**********93....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.6E-1158108IPR001471AP2/ERF domain
CDDcd000182.58E-2958115No hitNo description
Gene3DG3DSA:3.30.730.102.8E-2959115IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-2159116IPR016177DNA-binding domain
PROSITE profilePS5103222.04959116IPR001471AP2/ERF domain
SMARTSM003801.1E-3259122IPR001471AP2/ERF domain
PRINTSPR003672.4E-96071IPR001471AP2/ERF domain
PRINTSPR003672.4E-98298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MEDAIRRLNG ATQNPETNPT ETTFPDHPKK PSTTATATAT ANPNKRALRD GPPSGGATRY  60
RGVRRRPWGR YAAEIRDPQS KERRWLGTFD TAEEAACAYD CAARAMRGIK ARTNFVYPNS  120
PPPLPHSAHH HHLFNYSKQS ASSQTFRGFP IGSRSSWQST LATGGDFNLA ASQRSVAGSS  180
GLDMLLLRDF LNPSPSATTG SLYSPYGHFP NLQTLTTSTP ITFSAGSLVS PSTGNPCSST  240
SSMNLHLAED HQICPVESPV SASISTIAST TTENHKQDVE QLFTQEYSSG NSGLLEEVIE  300
RFFPKPSSPP KSQPTCSSAT AEEPAASVEC SAAGSEYASD STASLEQLES FDILAAAGPQ  360
ATALWGEWPE SGLQMLQDQY SLFEDVLQCP DYVMSSFAAA TVENA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-19591151471Ethylene-responsive transcription factor ERF096
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010046634.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
STRINGXP_010046634.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-12DORNROSCHEN-like