PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC008884.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 301aa    MW: 34728.6 Da    PI: 8.3971
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC008884.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.39.1e-47131393128
           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 
                   pGfrFhPt+eel+++yL++ +++kkl++ +vi  ++iy+++P++Lp  +k +e+ewyfF++rd+k+ +g r+nr+tk+g+Wkatg+d++++s   ++
  EcC008884.40  13 PGFRFHPTEEELLDFYLRNMISNKKLRF-DVIGFLNIYHYDPRELPGLAKIGEREWYFFVPRDRKHGSGGRPNRTTKHGFWKATGSDRKIVSLsdHK 108
                   9*************************99.99***************8888899*************************************9986688 PP

           NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   ++ gl+ktLvfy+grap+g+ktdWvm+eyrl
  EcC008884.40 109 RVLGLRKTLVFYEGRAPRGSKTDWVMNEYRL 139
                   88***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100554.05711156IPR003441NAC domain
SuperFamilySSF1019411.83E-5512156IPR003441NAC domain
PfamPF023654.1E-2513139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006032Biological Processchitin catabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0016998Biological Processcell wall macromolecule catabolic process
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
GO:0004568Molecular Functionchitinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MEEPTPTPEL ELPGFRFHPT EEELLDFYLR NMISNKKLRF DVIGFLNIYH YDPRELPGLA  60
KIGEREWYFF VPRDRKHGSG GRPNRTTKHG FWKATGSDRK IVSLSDHKRV LGLRKTLVFY  120
EGRAPRGSKT DWVMNEYRLP DDSSPKEMVL CKIYRKATSL KVLEQRAAMG EGMNKAATAA  180
VAHLSPPSPF SPMETSSSFN TQQYDLMPSM RESKIVFKQE LLEEAEDEQE VQGFITSPPQ  240
DHFVNKVMTK GSSSSLQMPT GKEKLPELQL PKMPADWTQD NFWTQFNSPW LQNLNTPYLT  300
F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-4411596168NO APICAL MERISTEM PROTEIN
1ut4_B5e-4411596168NO APICAL MERISTEM PROTEIN
1ut7_A5e-4411596168NO APICAL MERISTEM PROTEIN
1ut7_B5e-4411596168NO APICAL MERISTEM PROTEIN
3swm_A5e-4411599171NAC domain-containing protein 19
3swm_B5e-4411599171NAC domain-containing protein 19
3swm_C5e-4411599171NAC domain-containing protein 19
3swm_D5e-4411599171NAC domain-containing protein 19
3swp_A5e-4411599171NAC domain-containing protein 19
3swp_B5e-4411599171NAC domain-containing protein 19
3swp_C5e-4411599171NAC domain-containing protein 19
3swp_D5e-4411599171NAC domain-containing protein 19
4dul_A5e-4411596168NAC domain-containing protein 19
4dul_B5e-4411596168NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028811.10.0PREDICTED: NAC transcription factor 29
SwissprotQ10S654e-94NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A059AQC50.0A0A059AQC5_EUCGR; Uncharacterized protein
STRINGXP_010028811.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38992860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-103NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]