PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS72178.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 340aa    MW: 35758.3 Da    PI: 5.88
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS72178.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.61.1e-22257319163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkr++rkq+NRe+ArrsR+RK+ae+e L++kv++L++eN++L++el +l++e++kl++e+
  EPS72178.1 257 ERELKRQKRKQSNRESARRSRLRKQAECEDLQQKVEALTNENRSLQDELRRLSEECEKLEAEN 319
                 89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.4E-27195IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1704.3E-20252317No hitNo description
SMARTSM003388.8E-22257321IPR004827Basic-leucine zipper domain
PfamPF001701.8E-20257319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288259322IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-12260316No hitNo description
CDDcd147025.53E-24262312No hitNo description
PROSITE patternPS000360264279IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MGSGEESTPT KSPKPSPSET SMTPTTPAYP DWSSSVQAVY GAGAATPFFA SPVASPATHP  60
YLWGAQHPLM APYGTPVPYP ALYPPGGVYA AHPSMALTPG AVVHGAPESE TKAAEGSNEH  120
ATKNSKFAPR SHVRKTGDGG GNAASGSGND VCTQSAESGS EGSSDGSENN NQEYSAAKKG  180
SFDQMLADGA NAQNNGGNGF VIPIPVTNLN IGMDLWGNAA APAAGSGSLK LHPNPHTVSP  240
AAAPPSGMVN GQWVQDEREL KRQKRKQSNR ESARRSRLRK QAECEDLQQK VEALTNENRS  300
LQDELRRLSE ECEKLEAENS VIKEELARVC GTEMMSKLDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273279RRSRLRK
2273280RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097214.11e-153G-box-binding factor 1-like isoform X1
TrEMBLS8E8J40.0S8E8J4_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.L00297.1.p1e-134(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37802446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.14e-79G-box binding factor 1
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]