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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS67448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | LFY | ||||||||
Protein Properties | Length: 121aa MW: 13459.4 Da PI: 9.5369 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 240.2 | 1e-73 | 1 | 106 | 281 | 386 |
FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLCh 379 vtnqvfr+akkaga+yinkPkmrhYvhCYalhcLde++s+alrrafkergenvGawrqacykplvaiaa q+wdida+f++hprLs+WYvPtkLrqLCh EPS67448.1 1 VTNQVFRFAKKAGANYINKPKMRHYVHCYALHCLDEDTSDALRRAFKERGENVGAWRQACYKPLVAIAAAQAWDIDAIFSSHPRLSVWYVPTKLRQLCH 99 9************************************************************************************************** PP FLO_LFY 380 lerskas 386 +ers+a+ EPS67448.1 100 AERSAAA 106 ***9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF01698 | 5.5E-71 | 1 | 106 | IPR002910 | Floricaula/leafy protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
VTNQVFRFAK KAGANYINKP KMRHYVHCYA LHCLDEDTSD ALRRAFKERG ENVGAWRQAC 60 YKPLVAIAAA QAWDIDAIFS SHPRLSVWYV PTKLRQLCHA ERSAAAAAAS ASSVTAADHM 120 P |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2vy1_A | 3e-64 | 1 | 103 | 59 | 161 | PROTEIN LEAFY |
2vy2_A | 3e-64 | 1 | 103 | 59 | 161 | PROTEIN LEAFY |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May regulate indeterminacy during leaf and flower development. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001310806.1 | 3e-71 | floricaula/leafy homolog | ||||
Refseq | XP_023873133.1 | 1e-72 | protein UNIFOLIATA-like, partial | ||||
Swissprot | O48559 | 2e-68 | UNI_PEA; Protein UNIFOLIATA | ||||
TrEMBL | S8DWA1 | 2e-84 | S8DWA1_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_008392692.1 | 2e-70 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6668 | 23 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 3e-57 | floral meristem identity control protein LEAFY (LFY) |
Publications ? help Back to Top | |||
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