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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT33384 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
NF-YC |
Protein Properties |
Length: 393aa MW: 44521.7 Da PI: 8.8547 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT33384 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 143.5 | 5.1e-45 | 219 | 321 | 2 | 101 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99
l++fw++q ie+atd+k+h + l ri+ki+kade v+misaeaPv++skace++ le+t+r+w+ ++enkr+tlkksd+aaav+rtd++dfl di+p d
EMT33384 219 LQQFWAQQrseIEQATDIKKHPVQLKRIRKIMKADEGVHMISAEAPVVFSKACEMLTLEMTMRAWMVTKENKRQTLKKSDVAAAVARTDVYDFLADIIPLD 319
89*****99999***************************************************************************************99 PP
NF-YC 100 el 101
e+
EMT33384 320 EM 321
87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 393 aa
Download sequence Send
to blast |
MPDRLPDAVR LFEELKKWDL ETCNVMISCY ARSGLVEQAL GFFVMALRNG VLPTEFTFAS 60 VLRWSSCFGL LKQGGQIHAL VYQRSLKHAR ELFNGVCVKD LLIISIYRRM EELCHPAALA 120 IKVGGRFRSN MDKRKILDAW AVHIRCKRKQ DAKFVVAYNG PGAYTGPQVS IACQKDGLGN 180 LSLQWVMLLV DQLVVMSHLV SEQSRHYQQQ LQQLHQRRLQ QFWAQQRSEI EQATDIKKHP 240 VQLKRIRKIM KADEGVHMIS AEAPVVFSKA CEMLTLEMTM RAWMVTKENK RQTLKKSDVA 300 AAVARTDVYD FLADIIPLDE MKEEGVGLHR AGPPPPPLGA PAGAYPYYYP PQLQVPGAAM 360 VHGGQQVPQG HLPHVWIDLQ EQQEKEDQQS ESG
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A (PubMed:26542958). Component of the NF-Y/HAP transcription factor complex (By similarity). {ECO:0000250, ECO:0000269|PubMed:26542958}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian-regulation under long day (LD) conditions. Expression increases in the middle of daytime, peaks around the end of the light period and gradually decreases during the dark period and beginning of daylight. {ECO:0000269|PubMed:26542958}. |