PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT19032 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 165aa MW: 17926.7 Da PI: 9.5958 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79.1 | 4.9e-25 | 87 | 137 | 2 | 51 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveit 51 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++t EMT19032 87 SDGCQWRKYGQKMAKGTPCPRAYYRCTMAaGCPVRKQVQRCAEDRTVLITT 137 7***************************99***************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.760.10 | 8.8E-4 | 2 | 67 | IPR009056 | Cytochrome c-like domain |
Gene3D | G3DSA:2.20.25.80 | 1.6E-27 | 71 | 137 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-22 | 79 | 137 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.066 | 81 | 139 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.4E-25 | 86 | 140 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.0E-22 | 88 | 137 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0009055 | Molecular Function | electron carrier activity | ||||
GO:0020037 | Molecular Function | heme binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence Send to blast |
MDCAGCHGIV GAGKAELMPL PSFEHHGHHE RGGSPEAMQG WLPSKVPKFL PAAKGPEPPP 60 PEAAAAAATM RKARVSVRAR SEAAMISDGC QWRKYGQKMA KGTPCPRAYY RCTMAAGCPV 120 RKQVQRCAED RTVLITTLST GTELNTISTE KQRFHGPPDV YIKIW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-17 | 73 | 138 | 1 | 65 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT085752 | 6e-52 | BT085752.2 Zea mays full-length cDNA clone ZM_BFc0057C03 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020176350.1 | 2e-95 | probable WRKY transcription factor 31 | ||||
Swissprot | Q9XEC3 | 1e-42 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | R7W9U1 | 1e-119 | R7W9U1_AEGTA; Putative WRKY transcription factor 42 | ||||
STRING | EMT19032 | 1e-119 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12695 | 27 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 4e-33 | WRKY family protein |