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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0772s00002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | ERF | ||||||||
Protein Properties | Length: 162aa MW: 17952 Da PI: 6.5092 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.1 | 9.4e-13 | 90 | 139 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+ ++ +grW+++I +p g +k+++lg f + eAa+a+++ +l+g Dusal.0772s00002.1.p 90 SSFRGVTSHP-SGRWESRIGVP---G-SKHVYLGLFEEEVEAARAYDRSLVRLRG 139 679*******.7*********8...3.6**********99********9999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.3E-4 | 36 | 66 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-14 | 90 | 148 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 7.99E-22 | 90 | 147 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 2.5E-17 | 91 | 147 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-23 | 91 | 153 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.7E-5 | 91 | 133 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.633 | 91 | 147 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.5E-6 | 92 | 103 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.5E-6 | 129 | 149 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MKCASHGIIF VQTFHPLTTL SQLSKSDALD PTVPSGGYDL EEHAAEAYDV AALKTKKNGN 60 LKTNFDVERY QELFGCMHTI SLEGHSRGSS SFRGVTSHPS GRWESRIGVP GSKHVYLGLF 120 EEEVEAARAY DRSLVRLRGS NAATNFALND YVKETEEHYQ AL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CAC[AG]N[AT]TNCCNANG-3'. Required for the initiation and growth of ovules integumenta, and for the development of female gametophyte. Plays a critical role in the development of gynoecium marginal tissues (e.g. stigma, style and septa), and in the fusion of carpels and of medial ridges leading to ovule primordia. Also involved in organs initiation and development, including floral organs. Maintains the meristematic competence of cells and consequently sustains expression of cell cycle regulators during organogenesis, thus controlling the final size of each organ by controlling their cell number. Regulates INO autoinduction and expression pattern. As ANT promotes petal cell identity and mediates down-regulation of AG in flower whorl 2, it functions as a class A homeotic gene. {ECO:0000269|PubMed:10528263, ECO:0000269|PubMed:10639184, ECO:0000269|PubMed:10948255, ECO:0000269|PubMed:11041883, ECO:0000269|PubMed:12183381, ECO:0000269|PubMed:12271029, ECO:0000269|PubMed:12655002, ECO:0000269|PubMed:8742706, ECO:0000269|PubMed:8742707, ECO:0000269|PubMed:9001406, ECO:0000269|PubMed:9093862, ECO:0000269|PubMed:9118807}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_005650140.1 | 3e-49 | AP2-domain-containing protein | ||||
Refseq | XP_011396011.1 | 5e-49 | AP2-like ethylene-responsive transcription factor PLT2 | ||||
Swissprot | Q38914 | 6e-24 | ANT_ARATH; AP2-like ethylene-responsive transcription factor ANT | ||||
TrEMBL | A0A059LQJ1 | 2e-50 | A0A059LQJ1_9CHLO; Uncharacterized protein (Fragment) | ||||
STRING | XP_005650140.1 | 1e-48 | (Coccomyxa subellipsoidea) | ||||
STRING | A0A087SBN7 | 2e-48 | (Auxenochlorella protothecoides) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP56 | 16 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 2e-23 | AP2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0772s00002.1.p |