PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do018042.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 304aa    MW: 32376.6 Da    PI: 9.8607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do018042.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-184595256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f taeeAa+a++ a+++++g+
  Do018042.1 45 RYRGVRRRP-WGRFAAEIRDPM----SrERRWLGTFNTAEEAARAYDVAARAMRGN 95
                69*******.**********95....35999**********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.23E-2844104No hitNo description
SuperFamilySSF541713.47E-2245103IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-3045103IPR001471AP2/ERF domain
PROSITE profilePS5103223.60445102IPR001471AP2/ERF domain
SMARTSM003801.9E-3545108IPR001471AP2/ERF domain
PfamPF008475.5E-124594IPR001471AP2/ERF domain
PRINTSPR003677.7E-104657IPR001471AP2/ERF domain
PRINTSPR003677.7E-106884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MEGAANAHLY AHTHGHHHRR SKCPTPAAIV DVDVDGGDAS PKGARYRGVR RRPWGRFAAE  60
IRDPMSRERR WLGTFNTAEE AARAYDVAAR AMRGNKARTN FPVHAAAPGY WPWGAPGALP  120
LNPVLVHSLI MSSSHHGWRL PHHAGQGHPS PAQPRAPAPV PTPAASAAGA MAALAVASPV  180
ASSPVASSED MDVWGRVLRS DPPDAGLLQD ALHGFYPGML PRTVQRRKEL GGATADARAA  240
AAVLTKQERH EAFAVAPPCA GDVDEEGEYP MMPQGLLEDM IQYPAFVVPV AAPPAATPRG  300
RRRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-19441021372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo018042.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955046.11e-114ethylene-responsive transcription factor 3
TrEMBLA0A1E5V7Q70.0A0A1E5V7Q7_9POAL; Uncharacterized protein
STRINGSi019328m1e-113(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72633050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.13e-10ERF family protein