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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do015790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
ERF |
Protein Properties |
Length: 329aa MW: 35058.8 Da PI: 6.2691 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do015790.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 21.7 | 4.9e-07 | 138 | 170 | 16 | 51 |
AP2 16 vAeIrdpseng.krkrfslgkfgtaeeAakaaiaark 51
vA ++d g r++++lg++ t eeAa a++a ++
Do015790.1 138 VATVWD----GqARRSIWLGSYETSEEAAYAYDAGAR 170
677777....6567*******************9776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MEKEGGAPPG RELPPRPAVE EVEAAATVLA SADVEEEARL AEIAGKEARP VPSVPAQLLD 60 VLREAKRNTV SLRALLQRKE AAHVVELERR FKVFDDLIQR ASRVVSXGDG GGGDGVVIVD 120 KDRKGDMNLK FDNTRRAVAT VWDGQARRSI WLGSYETSEE AAYAYDAGAR TVQGRWARPN 180 FPEPSARAAA RAVDATAAEV LTDLARLRRA QEPAAAHNFL PQPTPRPQAP YFHSWAPAPA 240 PAGAAQHHQR AAPSFFYRSG AAYGAAFFAG TFVPGVYVVP NHPASSALSS SGPIFTSTTA 300 MGPDQSVVGD NFTDDVASSS VAPTYGEAQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU956771 | 3e-80 | EU956771.1 Zea mays clone 1573266 protein lap4 mRNA, complete cds. |