 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do014342.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
WRKY |
Protein Properties |
Length: 315aa MW: 34556.5 Da PI: 5.4652 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do014342.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 82 | 5.9e-26 | 149 | 207 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s C+++k vers p v+++tY eH h
Do014342.1 149 TDLWAWRKYGQKPIKGSPYPRGYYKCSSLkACMARKLVERSPAKPGVLVVTYIAEHCHA 207
699************************9989*************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MEYSNDWDLQ AVVRSCSGSN SEAAPAEPRL EEAPREIRVG RAAAVPELLG QPVRRPAAAL 60 RDLDYLDLDH ELPRAPFSIT PSSERGPLDH EVLFSFPAAS TSGQQQLLQP RKQPGRKPGV 120 RTPRPKRSKK SQLKKVVCEV PVADGGVSTD LWAWRKYGQK PIKGSPYPRG YYKCSSLKAC 180 MARKLVERSP AKPGVLVVTY IAEHCHAVPT MLNALAGTTR HRPASPDDDH QASQQSHGAS 240 DEAASAKREE YSADASSMTV DGGGSAETTA DGENEPWQVD MALDDYPLDD FLGPFDDDFD 300 RFFEDDGVLE RRVSL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK111416 | 9e-99 | AK111416.1 Oryza sativa Japonica Group cDNA clone:002-182-G03, full insert sequence. |
GenBank | AY870601 | 9e-99 | AY870601.1 Oryza sativa (japonica cultivar-group) WRKY12 mRNA, complete cds. |