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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_015710 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | GeBP | ||||||||
Protein Properties | Length: 256aa MW: 28603 Da PI: 5.1608 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 81.4 | 1.3e-25 | 70 | 164 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++r++++eDei+l G+i+fk+++ + s ++ af +fvk+s+s vs++ql++Ki +LK+Kf +v+k ++g++p ++hd k fels+ i g DCAR_015710 70 VSRVFTKEDEIALVEGMIEFKETNQGNLSLNMAAFRSFVKDSLSCIVSQKQLLSKISKLKQKFLVNVSKLQNGEDPMSWRPHDYKLFELSRDILG 164 78******************9999999999*************************************************************9976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.1E-20 | 71 | 162 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MAQPQYLPSS SSKSESLVQE ISSDDFGSNS GSESQQLTKT PYDNVSPALK KPTSPLKPNA 60 KPPSIKAELV SRVFTKEDEI ALVEGMIEFK ETNQGNLSLN MAAFRSFVKD SLSCIVSQKQ 120 LLSKISKLKQ KFLVNVSKLQ NGEDPMSWRP HDYKLFELSR DILGSEVLGG MEKDNKDDHV 180 ASKTEEEPVL WWSLYPCLCV SLESVNVAKL VGAGPYLLLS MVVCLVYQLS FPVSFWDLCM 240 LFILFALYFE MMRFS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017227785.1 | 1e-108 | PREDICTED: uncharacterized protein LOC108192218 | ||||
TrEMBL | A0A165A555 | 0.0 | A0A165A555_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00270.1 | 4e-06 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | DCAR_015710 |