PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa17g071450.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family bZIP
Protein Properties Length: 429aa    MW: 45747.3 Da    PI: 9.8965
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa17g071450.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-14350405560
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                     +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+ +  ++ ++ ++ +
  Csa17g071450.1 350 RRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEENDELQRKQAKIMEMQKNQE 405
                     79***************************************999888888876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-13346410IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346348411IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-10350399No hitNo description
Gene3DG3DSA:1.20.5.1706.6E-14350400No hitNo description
PfamPF001703.4E-12350406IPR004827Basic-leucine zipper domain
CDDcd147072.19E-27350404No hitNo description
PROSITE patternPS000360353368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MDGNMNFKNN NLGNEPPGDG GGLGGLTRPG LTRQGSIYSL TFDEFQSSLG KDFGSMNMDE  60
LLKNIWSAEE TQAMASGMVP VVGGGQEGLQ LQKQGSLTLP RTLSQMTVDQ VWKDLSKVGN  120
SGGGGTNLSQ AQQVQAQNQN QSQGQRQQTL GEVTLEEFLV RAGVVREEAE IAAKAQIAEN  180
NKAGYFGNDA NMGFPVGFQQ PSPRVVAAGV MGAENANPLQ VQGSSLPLNV NGARSTYQQP  240
QQLQPTIMPK QPGFGYGTQI GQLNSPGIRG GGIMGFGYQS QTNNMGLVNG GAAAIPGAVG  300
VGAVSPVTPL SSEGIGKSNG DCSSLSPSPY MFNGGVRGRK SGTVEKVVER RQRRMIKNRE  360
SAARSRARKQ AYTVELEAEV AKLKEENDEL QRKQAKIMEM QKNQEMELRN LVQGGPKKRL  420
RRTESGPW*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa17g071450.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0171600.0AB017160.1 Arabidopsis thaliana mRNA for ABA-responsive element binding protein 1 (AREB1), complete cds.
GenBankAF0935450.0AF093545.1 Arabidopsis thaliana clone 2 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds.
GenBankBT0264430.0BT026443.1 Arabidopsis thaliana At1g45249 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010479095.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9M7Q40.0AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLR0GWZ70.0R0GWZ7_9BRAS; Uncharacterized protein (Fragment)
STRINGXP_010479095.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-175abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]