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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Csa11g093170.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
WOX |
| Protein Properties |
Length: 256aa MW: 28620.8 Da PI: 9.5245 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g093170.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.9 | 1e-19 | 14 | 73 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++tk+q++ Le+l+++ r+psa+++++++ +l +++ ++V++WFqN++a+ ++
Csa11g093170.1 14 SRWNPTKDQITLLENLYKQgIRTPSADQIQQITGRLraygHIEGKNVFYWFQNHKARLRQ 73
8*****************99*************************************996 PP
|
| 2 | Wus_type_Homeobox | 113.4 | 1.2e-36 | 12 | 75 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+Pt++Qi++Le+lyk+G+rtP++++iq+it +L++yG+ie+kNVfyWFQN+kaR rqkq
Csa11g093170.1 12 SSSRWNPTKDQITLLENLYKQGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARLRQKQ 75
689***********************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MEYEGNAGSN ASSSRWNPTK DQITLLENLY KQGIRTPSAD QIQQITGRLR AYGHIEGKNV 60
FYWFQNHKAR LRQKQKQERI TYFNRLLHKT SRFFHPPPCS NGTPYYLQQV GDHHIHQHGN 120
VYGNNLLHRN NVVIPSGGYE KRTITDHKKQ QLADITARTT RMSMSSRFDR FALCDHFDGE 180
GINVNSGGRK TLPLFPLQPS HGTSDAGAGN SCFAPGSDIP VVCFGDDGGR EQPFMIDFFS 240
GGGSSSRFDN NGNAL*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in embryonic patterning. Required for apical embryo development after fertilization. Its specific localization to the apical daughter cell of the zygote, while WOX8 is confined to the basal cell, suggests that the asymmetric division of the plant zygote separates determinants of apical and basal cell fates. {ECO:0000269|PubMed:14711878}. |
| Publications
? help Back to Top |
- Liang Z,Brown RC,Fletcher JC,Opsahl-Sorteberg HG
Calpain-Mediated Positional Information Directs Cell Wall Orientation to Sustain Plant Stem Cell Activity, Growth and Development.
Plant Cell Physiol., 2015. 56(9): p. 1855-66
[PMID:26220906] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
WUSCHEL-RELATED HOMEOBOX 2 is important for protoderm and suspensor development in the gymnosperm Norway spruce.
BMC Plant Biol., 2016. 16: p. 19
[PMID:26786587] - Zhang Z,Tucker E,Hermann M,Laux T
A Molecular Framework for the Embryonic Initiation of Shoot Meristem Stem Cells.
Dev. Cell, 2017. 40(3): p. 264-277.e4
[PMID:28171749]
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