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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_33973_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
TALE |
Protein Properties |
Length: 405aa MW: 45679.7 Da PI: 7.2183 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_33973_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 28.5 | 2.7e-09 | 333 | 367 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++++ LA+++gL+++q+ +WF N+R ++
Cotton_A_33973_BGI-A2_v1.0 333 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 367
569*****************************885 PP
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2 | ELK | 40.9 | 4.2e-14 | 287 | 308 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLkqEF+
Cotton_A_33973_BGI-A2_v1.0 287 ELKGQLLRKYSGYLGSLKQEFM 308
9********************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MEGGSSSTSC MMAFGHNSNG LCPMTMMHHP MTSHLHPQHQ HHHHHPNSGS SSLFLPQPPT 60 NNQDQNHNSS SGSSMILDDQ HNTTTSNNNN TGCYFMESND GSSSVKAKIM AHPHYHRLLA 120 AYVNCQKVGA PPEMVARLEE ACASAATMGP TRTGCIGEDP ALDQFMEAYC EMLTKYEQEL 180 TKPFKEAMLF LQRVECQFKA LTVSSPNPDC RVKEYLGQRT TLLPSLVAKS SENGITMETI 240 YAALLARASL HHVVRKACGE GVDRNALSEE DVDVNNNFID PLAEDRELKG QLLRKYSGYL 300 GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES QKLALAESTG LDQKQINNWF 360 INQRKRHWKP SEDMQFVVMD AAHPHYYMDN VLGNPFPMDL SPTLL
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 302 | 311 | LKQEFMKKRK |
2 | 308 | 312 | KKRKK |
Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |