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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_30135_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 372aa MW: 40680.7 Da PI: 7.8579 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_30135_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.2 | 4.3e-18 | 65 | 114 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp++ + r +lg+f+taeeAa a++ a+++++g
Cotton_A_30135_BGI-A2_v1.0 65 KYRGVRRRP-WGRYAAEIRDPKS---KERRWLGTFDTAEEAACAYDCAARAMRG 114
8********.**********843...4999**********************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009733 | Biological Process | response to auxin |
GO:0009880 | Biological Process | embryonic pattern specification |
GO:0048825 | Biological Process | cotyledon development |
GO:0051726 | Biological Process | regulation of cell cycle |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MEEVFRRLNG IPHVPDPDPD PHPHPHSILN PIKCSASTTA VPTNTTTTSK KRFLKENGGP 60 GGTIKYRGVR RRPWGRYAAE IRDPKSKERR WLGTFDTAEE AACAYDCAAR AMRGMKARTN 120 FVYPATDPHS PNGPFLPPFN FSNPSQLSIR DLNHTRYQFG NCSNRPLFAK PPHSMVHHLP 180 FINGTSSSSL SSTFPIPSVL PATTFFNSSP SSSLWLSDNS SGPFTASTMT LPLKDKNSSV 240 TTVVPAPAIS TCQADDMGMG LFFPQGPSDS GLLEEIIQGF LPNPTSRNSG LVCSTTSNCT 300 QHSIVSPPTE MSFTGLNLKE IKNESLGFYM DYHPQLESLN GTANSRVVPN SNEIPLSHLQ 360 LGQDSMPDDI FQ
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