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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_28528_BGI-A2_v1.0 |
Common Name | F383_23688 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 296aa MW: 33471.1 Da PI: 5.6941 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_28528_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.1 | 5.1e-19 | 76 | 124 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g
Cotton_A_28528_BGI-A2_v1.0 76 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 124
9*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0034059 | Biological Process | response to anoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MCGGAIISEF ITRKGAHGVT ASDIWPNSPF VKNGFSSDST QSFHDDSLAL CKRHRPQSSD 60 GVQVEKKVKR QRKNLYRGIR QRPWGKWAAE IRDPRKGVRV WLGTFNTAEE AARAYDREAR 120 KIRGKKAKVN FPNEDDAFST QYNPQINNST TAWNFTHPSN PPIYQHPQIN NGFHYGWNDL 180 GGFATDPIVV SEEESSGSGD QNTNLFYLPV KPEEQQEGEA VNKSAIFEVQ EEENQAQKLS 240 EELIAYENYM KFFQIPYLDG QSPMTQNAVA QQESVFGELW NFLDDGVAVP PTSMPM
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