 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_15664_BGI-A2_v1.0 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
Family |
NAC |
Protein Properties |
Length: 378aa MW: 43351.4 Da PI: 5.1804 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_15664_BGI-A2_v1.0 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 111.9 | 7.1e-35 | 5 | 145 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrkn 75
+GfrFhPtd e + e L +kv+ ++ ++ + vi+++ di+k+eP +Lp +++ ++++ wyfF++ + ky+++krkn
Cotton_A_15664_BGI-A2_v1.0 5 KGFRFHPTDAEAI-ELLWEKVQLDRDSFVQlgdslvpVITQLnDICKFEPAELPgrSELVSGDNVWYFFCSPRYKYRNSKRKN 86
7************.99999999999444444556665899998***********5336677999******************* PP
NAM 76 ratksgyWkatgkdkevlsk..kgelvglkktLvfykg....rapkgektdWvmheyrl 128
r+tk+gyW+ tgk ++++++ +++ +g+++ Lvfykg +++k++kt W+mhe++l
Cotton_A_15664_BGI-A2_v1.0 87 RVTKKGYWNPTGKFRTIVTTcdGKKITGTRQALVFYKGrvcvKNKKANKTLWIMHEFEL 145
******************99878888**********753333789999*********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MNYVKGFRFH PTDAEAIELL WEKVQLDRDS FVQLGDSLVP VITQLNDICK FEPAELPGRS 60 ELVSGDNVWY FFCSPRYKYR NSKRKNRVTK KGYWNPTGKF RTIVTTCDGK KITGTRQALV 120 FYKGRVCVKN KKANKTLWIM HEFELTLNLP NQKSLILCKL KKKYGKVNVS IGEEEQSNQY 180 LPSSNLENHC TNNGIPKEQL NSTEQVAFNE NSGIQSELVN NEQTIDEFVD SLLIKNDEFY 240 SNQPYFVHDK QDPKNQEGFS DLTYQKLRTP NDRVWTMNEV GSSSALVAND PSYSDGDNNQ 300 HDTYFAEQGS ILAFENHVLV DSISMGGSGF DEFLHDGLFM AELSPLPKPP KNPDEVQNHQ 360 FSTNEQDEFW NSIFITTD
|