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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_07159_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 327aa MW: 36600.8 Da PI: 6.6843 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_07159_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 178 | 228 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp + + r++lg+f+ta eAaka+++a+ kl+g
Cotton_A_07159_BGI-A2_v1.0 178 HYRGVRQRP-WGKFAAEIRDP---NrRGSRIWLGTFDTAIEAAKAYDRAAFKLRG 228
8********.**********9...4334*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
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to blast |
MESSSEVSSA LQYIEQYLLD ENQFTPAGLG SFSTANQWIN EPIPEVSTSP SQSLCSQTST 60 SDSCLTLSNF NCLDVDDFFN FSPNFPGFES NRMDVFEFDS KPQFIHLTAP KPFEFAPQIT 120 ELSAVKPPAP SNSSSSSHNR KPSLKISLPH KVEWIQFRKP YSTKAQPTNS NSEDKNKHYR 180 GVRQRPWGKF AAEIRDPNRR GSRIWLGTFD TAIEAAKAYD RAAFKLRGSK AILNFPLEAG 240 KLDVTAIDGE RKRSRDDGAW DEKQVKAVKR ANDDVTKARD NGDGPLTPSN WTSFMDWDNE 300 AKGIFNMPLL SPLSPHPPLG FQQVTVI
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325}. |