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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_06374_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
MYB |
| Protein Properties |
Length: 246aa MW: 27626.7 Da PI: 7.1338 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_06374_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 64 | 2.9e-20 | 9 | 54 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEdell ++v+++G ++W++++r ++ gR++k+c++rw +
Cotton_A_06374_BGI-A2_v1.0 9 KGSWSPEEDELLRKLVHRHGARNWSLVSRSIP-GRSGKSCRLRWCNQ 54
799*****************************.***********985 PP
|
| 2 | Myb_DNA-binding | 53.9 | 4e-17 | 63 | 105 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T eEd +v+a++++G++ W+tIar ++ gRt++ +k++w++
Cotton_A_06374_BGI-A2_v1.0 63 AFTSEEDGVIVKAHAKYGNK-WATIARLLN-GRTDNAVKNHWNST 105
79******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MDQDVDRVKG SWSPEEDELL RKLVHRHGAR NWSLVSRSIP GRSGKSCRLR WCNQLSPEVE 60
HRAFTSEEDG VIVKAHAKYG NKWATIARLL NGRTDNAVKN HWNSTLKRKL SEAEDGDSVQ 120
ESEKRSAKSP RRESPSGSEV SDLGLSVAKS NRHSADVVST ELTLGRSWNE SFEFNNISSS 180
EKKNEQPLEE KQVAGANMTT VALAQAATAA ITPAAMQEMI RKEVRDYMAE FDCKSENVRD 240
LWGRED
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
