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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla016169 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
NAC |
Protein Properties |
Length: 341aa MW: 39072.6 Da PI: 5.6612 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla016169 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.1 | 1.5e-52 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
lppGfrFhPtdeelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd+++ + +++
Cla016169 6 LPPGFRFHPTDEELVGYYLKRKVEGLPIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKINC-QSS 103
79****************************.99**************95344555788**************************************.999 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
++g +ktLvfy+grap g + dWvmheyr+
Cla016169 104 VMGYRKTLVFYRGRAPLGDRMDWVMHEYRI 133
9***************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008283 | Biological Process | cell proliferation |
GO:0071365 | Biological Process | cellular response to auxin stimulus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MGSGSLPPGF RFHPTDEELV GYYLKRKVEG LPIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKINC QSSVMGYRKT LVFYRGRAPL 120 GDRMDWVMHE YRICDDFSHG TPDFKGAFAL CRIVKKNEVA HKKDNHRESK GNVVGSSRAS 180 EDSVSTRLVA TNELLNILED NSSQTNFLTN ESGPMTTSYD TNPMSRYSTT IMETDPEKIW 240 ISPDLILDSS KDYPEMQGAM SICFPQYEYS GSTTPWQSYE HTEISPSSSY SNYTGDIELE 300 DNLNQIGGCI SPNSTHLNYM QHSINEQGFD LNNSQKYPNC F
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-52 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-52 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-52 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-52 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-52 | 5 | 162 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-52 | 5 | 162 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in tissue reunion of wounded inflorescence stems. Required for the division of pith cells in the reunion process, which is dependent on polar-transported auxin and the wound-inducible hormones ethylene and jasmonate (PubMed:21911380). Binds to the promoters of XTH19 and XTH20 to induce their expression via auxin signaling. XTH19 and XTH20 are involved in cell proliferation in the tissue reunion process of incised stems (PubMed:25182467). Involved in hypocotyl graft union formation. Required for the auxin- mediated promotion of vascular tissue proliferation during hypocotyl graft attachment (PubMed:27986917). {ECO:0000269|PubMed:21911380, ECO:0000269|PubMed:25182467, ECO:0000269|PubMed:27986917}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding in the flowering stem. {ECO:0000269|PubMed:21911380}. |