 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cla013424 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
|
| Family |
ERF |
| Protein Properties |
Length: 256aa MW: 28787.4 Da PI: 9.3269 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla013424 | genome | ICuGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.5 | 1.1e-20 | 105 | 155 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +grW+AeIrdp +r kr++lg+f+taeeAa+ +++a+ kl g
Cla013424 105 KKFRGVRQRP-WGRWAAEIRDP----IRrKRIWLGTFDTAEEAAAVYDRAAVKLQG 155
59********.**********7....246**********************99987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MAMEDMASLS EHKINYRRKP LTSGDSTKFK QKLVRIIVTD ADATDSSSED ELILRSRTAI 60
RREVREITIK RYSALDGSSA KSSVSEICKK RNPRSRRSRK SSRRKKFRGV RQRPWGRWAA 120
EIRDPIRRKR IWLGTFDTAE EAAAVYDRAA VKLQGPNATT NFSGDGSVTT VADGGSKQED 180
GLESRKTTAA WSPASVLHYD SVLTPIEEML YCGEIDEFGF AMAPSSLPAA RRQCGGEEDF 240
GEMELDLDYF LVDVIY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 88 | 105 | KKRNPRSRRSRKSSRRKK |
| 2 | 93 | 105 | RSRRSRKSSRRKK |
