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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla008710 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
MYB |
Protein Properties |
Length: 288aa MW: 33052.3 Da PI: 8.4467 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla008710 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.3 | 5.6e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l+++++ +G+g +W + +++ g++R++k+c++rw++yl
Cla008710 14 KGPWSPEEDSKLKHYIETYGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62
79*********************************************97 PP
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2 | Myb_DNA-binding | 39.8 | 1e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++
Cla008710 69 GEFSAEEDRIICTLFATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
789******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKKGPWSPE EDSKLKHYIE TYGTGGNWIS LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSAEEDRIIC TLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGM 120 VSSSSSNTTN YTPQAEIIKK TESLSPQSHQ NPSFDYQLLS NNNYDPLSSS LSTNSIPLFN 180 YCNPISSGSC LLTNPFDQNF YETLKHNQMQ MGFELEFSGL NSINFNNGFD EKMMMQQQIN 240 NSNNNNQGYI GNCLEGNAMK EEVEEVMEQK KKKKKREIME EKYHCYYY
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