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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc01_g10490 |
Common Name | GSCOC_T00024145001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
MYB |
Protein Properties |
Length: 364aa MW: 40676.2 Da PI: 7.5144 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc01_g10490 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 49.4 | 1.1e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l++ ++++G+g +W + +++ g++R++k+c++rw++yl
Cc01_g10490 14 KGPWSPEEDAKLKEFIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
79*********************************************97 PP
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2 | Myb_DNA-binding | 36.7 | 9.6e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g ++ +Ed ++ + + G++ W+ Ia+ ++ gRt++++k++w++
Cc01_g10490 69 GEFSDDEDRIICSLYASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
789******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKKGPWSPE EDAKLKEFIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC SLYASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 IPLDPRKLPP FSNSLHTTSS PQSQAFSSLS QLYNDCSPYY STSAKSCLTG FESFPSVQPN 180 LLFNGNNNNV NPMATITTAN HHSYLQGHNQ EGLISPMQFY PGKDNMLIFG GTDQASCSSS 240 DGSCSQISYG KEIKQEHMNG GSLQGYNLSN STNGYDHHHH QENQKFMVDY GNQISSTTWG 300 DGRGNDHDQK PSVVLCGNGT STTQLQYDLE EVKQLISSSN MSLFFNDENK THESREAMYY 360 YNY*
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