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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc00_g14270 |
Common Name | GSCOC_T00010610001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
NAC |
Protein Properties |
Length: 288aa MW: 33071.5 Da PI: 8.4665 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc00_g14270 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 152.4 | 2.1e-47 | 12 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98
pGfrFhPt+eel+++yLk+ ++g+k++ +vi ++iy+++Pw+Lp ++k +e+ewyfF++rd+++ +g r+nr+tk+g+Wkatg+d+++ s ++
Cc00_g14270 12 PGFRFHPTEEELLSFYLKRTASGRKIRS-DVIGFLNIYQHDPWELPGMAKIGEREWYFFVHRDRRHGHGGRPNRTTKDGFWKATGSDRQIRSLsdPKK 108
9**************************9.99***************888999**************************************98766778 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+ glkktLvfykgrap+g++tdW+m+eyrl
Cc00_g14270 109 VLGLKKTLVFYKGRAPRGSRTDWIMNEYRL 138
8***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MDNNSLGELP LPGFRFHPTE EELLSFYLKR TASGRKIRSD VIGFLNIYQH DPWELPGMAK 60 IGEREWYFFV HRDRRHGHGG RPNRTTKDGF WKATGSDRQI RSLSDPKKVL GLKKTLVFYK 120 GRAPRGSRTD WIMNEYRLPD NHHHLPKEDV VLCKIYRKAT SLKILEHRAA MEDIISKTVN 180 PTLSSTDQSQ EGKIPEENLG ESFSQKQSTI NLPMTKQEDD DLSVPNSSVK FGCLNYNCDL 240 KELQVLDVPK FSMDATTDAF WTQMRSPWLD NWSPSVYANL LNCSPHC*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swm_B | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swm_C | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swm_D | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swp_A | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swp_B | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swp_C | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
3swp_D | 3e-46 | 2 | 161 | 11 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |