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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cagra.0805s0005.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
NAC |
| Protein Properties |
Length: 281aa MW: 32285.1 Da PI: 9.2867 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.0805s0005.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 149.9 | 1.2e-46 | 8 | 135 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
pGfrFhPt+eel+++yLk+ v gk+ ++ evi+ ++iy+++PwdLp + +e+ewyfF++r++k+ +g r++r+t++gyWkatg+d++
Cagra.0805s0005.1.p 8 PGFRFHPTEEELLDFYLKNMVYGKRSSV-EVISFLNIYRHDPWDLPgLSRILGEREWYFFVPRERKHGNGGRPSRTTEKGYWKATGSDRK 96
9************************999.99***************533334789*********************************** PP
NAM 92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
++s ++++glkktLvfy+grap g+ktdWvm+e+r+
Cagra.0805s0005.1.p 97 IISLsePKRVIGLKKTLVFYRGRAPGGSKTDWVMNEFRM 135
*987557778***************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MGKETELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVISF LNIYRHDPWD LPGLSRILGE 60
REWYFFVPRE RKHGNGGRPS RTTEKGYWKA TGSDRKIISL SEPKRVIGLK KTLVFYRGRA 120
PGGSKTDWVM NEFRMPDNCT LPKDVVLCKI YRKATSLKVL EQRAEMEAKM NQTCPNSPLS 180
SSETISFIGK EENLMMASFR APQEIAMEEA NKFLTLQENA KNQEKHREIE TRDTSSSLKL 240
PFGSLPELQL PKQGVEWGPE LLSISPWLQN LTPIVNLLNW *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-44 | 8 | 158 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-44 | 8 | 158 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-44 | 8 | 158 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-44 | 8 | 158 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 2e-44 | 8 | 156 | 22 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 2e-44 | 8 | 158 | 19 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 2e-44 | 8 | 158 | 19 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
