PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG019002.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 399aa    MW: 42781.6 Da    PI: 6.6366
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG019002.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.32.5e-21262322363
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  elkre+rkq+NRe+ArrsR+RK+ae eeL+ kv++L++eN+aL++e+++ +++++kl+ e+
  CCG019002.1 262 ELKREKRKQSNRESARRSRLRKQAEAEELAHKVEVLTTENMALQSEINQFTEKSEKLRLEN 322
                  89*******************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.0E-29192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.7E-20125241No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-16254319No hitNo description
SMARTSM003389.7E-21260324IPR004827Basic-leucine zipper domain
PfamPF001703.9E-20262322IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.691262325IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.63E-11263319No hitNo description
CDDcd147021.49E-19265314No hitNo description
PROSITE patternPS000360267282IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MGNIEEGKSS TSDKSSPVPP DQTNIHVYPD GVAMQAYYGP RVALPPYYNS AVASGHAPHP  60
YMWGLPQHMM PHFGAPYATV YSHGVYAHPA VPIVSHPHGP GIVSSPAAGT LLSAETPTKS  120
SGNTDRGLVN KLKGFDGLAM SIGNGNAETF EGGGRLSQSV ETEVSSDGID GNSTREKKRS  180
REGTPTVATG GDTKMESHSS PLPREVNAST DNVLRAAVAP GMTTALELRN PPSVNAAKTS  240
PTTIPQSGVV LPSEAWLQNE LELKREKRKQ SNRESARRSR LRKQAEAEEL AHKVEVLTTE  300
NMALQSEINQ FTEKSEKLRL ENAALTEKLK NAQLGHAQEM ILNIDEHRAP AACTENLLSR  360
VNNSAFEEES DLYERNSNSG AKLHQLLDAS PRAGALAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276282RRSRLRK
2276283RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2080941e-107AC208094.1 Populus trichocarpa clone JGIACSB09-L10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011023232.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_011023233.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_011023234.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_011023235.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_011023236.10.0PREDICTED: G-box-binding factor 3-like isoform X1
SwissprotQ990891e-122CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A3N7FZJ80.0A0A3N7FZJ8_POPTR; Uncharacterized protein
STRINGPOPTR_0002s16870.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-121G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]