PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG017074.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 288aa    MW: 32011.3 Da    PI: 8.2613
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG017074.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-1757108156
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  + y+GVr++   ++Wv+e+r+p   +k+ r+++g+f ++e+Aa+a++ a+++l+ge
  CCG017074.1  57 PVYRGVRRRN-GNKWVCEVREP---NKKSRIWVGTFKSPEMAARAHDVAALALKGE 108
                  68*****887.9******9998...347*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.4E-1357108IPR001471AP2/ERF domain
PROSITE profilePS5103220.21858115IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-1958116IPR016177DNA-binding domain
SMARTSM003805.9E-2258121IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-2758117IPR001471AP2/ERF domain
PRINTSPR003679.9E-75970IPR001471AP2/ERF domain
CDDcd000181.09E-2559117No hitNo description
PRINTSPR003679.9E-78197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MEFENYSSSQ SSICQTLSCK QCNSPNINNP LRGQERPVVV LKKNKAGRKK FKETRHPVYR  60
GVRRRNGNKW VCEVREPNKK SRIWVGTFKS PEMAARAHDV AALALKGEFA ALNFLDSALI  120
LPRAKSSSAE DIQRAALAAT EVFGRSASSC SSSSSPDHKK LSCVTRSRKV LSPSLSDLPH  180
EKGTENVLRP SLIDTQSVEI YDKKVSNEEP SSNMVMSCSN NCCPEKMPNH SNATFFDEEA  240
LFNMPGLLDS MAEGLILTPP AMARGVYWDD MACSTDLTLW EDDYLHSQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC3442710.0KC344271.1 Populus hopeiensis DREB66 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011044621.10.0PREDICTED: dehydration-responsive element-binding protein 1F-like
TrEMBLA0A3N7GBZ40.0A0A3N7GBZ4_POPTR; Uncharacterized protein
STRINGPOPTR_0009s14990.16e-91(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-33dehydration response element B1A