PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG010758.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 377aa    MW: 40108.5 Da    PI: 7.2197
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG010758.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.26.7e-22264326163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  ++elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L++ N+aLk+e+++ +++++kl+ e+
  CCG010758.2 264 DRELKRERRKQSNRESARRSRLRKQAEAEELAHKVETLTTVNMALKSEIDQFTEKSQKLRLEN 326
                  689********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-34193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.5E-27126245No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-16258323No hitNo description
SMARTSM003382.7E-21264328IPR004827Basic-leucine zipper domain
PfamPF001702.4E-20265326IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.277266329IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.5E-10267323No hitNo description
CDDcd147021.59E-19269318No hitNo description
PROSITE patternPS000360271286IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MGNNEEGKSS ASDKSSPAPQ DQTSIHVYPD WAAIQAYYGS RVALPPYYNS GVASGHAPHP  60
YMWGPPQPMM ATYGAPYAAI YSHGGVYAHP AVPIGSHPHG PGVLSSPAAH TPLSAETPTK  120
SSGNTDQGLM KKLKGFDGLA MSIGNGDAES AEGGSRLPQS METEGSSDGS DGNTARGKKR  180
SREGTPTVDH HTTGGDTKTE THCSPLLGEV NPSTDKVLGA VVDPGMTKAL ELRNPPSVNV  240
AKTNPATIPQ PGAMLPSEAW SPNDRELKRE RRKQSNRESA RRSRLRKQAE AEELAHKVET  300
LTTVNMALKS EIDQFTEKSQ KLRLENAALT EKLKNAQLGP TQEMILNNID EQRNSNSGAK  360
LHQLLDASPR ADAVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280286RRSRLRK
2280287RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2080946e-45AC208094.1 Populus trichocarpa clone JGIACSB09-L10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011037545.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_011037563.10.0PREDICTED: common plant regulatory factor 1-like isoform X3
SwissprotQ990891e-121CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A3N7FZK40.0A0A3N7FZK4_POPTR; Uncharacterized protein
STRINGPOPTR_0014s08990.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-115G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]